Lens images of AB and TL wildtype zebrafish strains

http://rdp.utas.edu.au/metadata/49c9eccd-de00-4a39-82a3-59fee49857df

Creators:
Bibek Khatiwada (0000-0001-9754-6525)
Co-Creators:
Kathryn Burdon (0000-0001-8217-1249) , Johanna Jones (0000-0002-6475-9134)

Menzies Institute for Medical Research

cataract zebrafish genetics strain

The lenses of the 4dpf zebrafish larva were live imaged and photographed using Differential Interference Contrast (DIC) illumination, using an inverted microscope (Nikon Eclipse Ti-E) equipped with Zyla 4.2 PLUS sCMOS camera (Zyla 4.2, Andor) and NIS-Elements AR acquisition software (Nikon). AB, TL and mCherry zebrafish lines were used. Images were collected from multiple clutches. The broodstocks used in producing those clutches were obtained from multiple housing tanks in our facility. The images are in .tif file format. Images are named as Strain_TankNumber_ClutchNumber_ImageNumber. For each fish, a single lens image was captured. Images were evaluated for cataracts using the ImageJ program. The evaluation process adhered to the guidelines set forth by Zhao et al., 2021, which included an assessment of the severity of the cataracts. In addition to lens images, the cataract score sheet is provided. Clutch-wise and tank-wise statistics on cataract occurrences were computed, and the accompanying R scripts used for these calculations are included.

310599 Genetics not elsewhere classified 310903 Animal developmental and reproductive biology 321201 Ophthalmology
280102 Expanding knowledge in the biological sciences

Data Access

  1. Lens Images.zip ({{8375618216 | bytes}})
  2. Lens Score Sheet for Cataract .xlsx ({{32128 | bytes}})
  3. R Scripts for Statistics.html ({{669280 | bytes}})


Khatiwada, B, Burdon, K, Jones, J (2024) Data from: Lens images of AB and TL wildtype zebrafish strains. https://dx.doi.org/10.25959/vaqf-px88
10.25959/vaqf-px88 (DataCite reference)
Bibek Khatiwada (0000-0001-9754-6525)
Kathryn Burdon (0000-0001-8217-1249)
Johanna Jones (0000-0002-6475-9134)
25-Mar-2024